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2.
Braz. j. microbiol ; 46(4): 969-976, Oct.-Dec. 2015. tab, graf
Article in English | LILACS | ID: lil-769656

ABSTRACT

Abstract Yellow pigmented, filamentous, Gram-negative bacteria belonging to genus Flavobacterium are commonly associated with infections in stressed fish. In this study, inter-species diversity of Flavobacterium was studied in apparently healthy freshwater farmed fishes. For this, ninety one yellow pigmented bacteria were isolated from skin and gill samples (n = 38) of three farmed fish species i.e. Labeo rohita, Catla catla and Cyprinus carpio. Among them, only twelve bacterial isolates (13.18%) were identified as Flavobacterium spp. on the basis of morphological, biochemical tests, partial 16S rDNA gene sequencing and phylogenetic analysis. On the basis of 16S rDNA gene sequencing, all the 12 isolates were 97.6-100% similar to six different formally described species of genus Flavobacterium. The 16S rDNA based phylogenetic analysis grouped these strains into six different clades. Of the 12 isolates, six strains (Fl9S1-6) grouped with F. suncheonense, two strains (Fl6I2, Fl6I3) with F. indicum and the rest four strains (Fl1A1, Fl2G1, Fl3H1 and Fl10T1) clustered with F. aquaticum, F. granuli, F. hercynium and F. terrae, respectively. None of these species except, F. hercynium were previously reported from fish. All the isolated Flavobacterium species possessed the ability of adhesion and biofilm formation to colonize the external surface of healthy fish. The present study is the first record of tropical freshwater farmed fishes as hosts to five environmentally associated species of the Flavobacterium.


Subject(s)
Animals/classification , Animals/genetics , Animals/isolation & purification , Animals/microbiology , Animals/physiology , Animals/veterinary , DNA, Bacterial/classification , DNA, Bacterial/genetics , DNA, Bacterial/isolation & purification , DNA, Bacterial/microbiology , DNA, Bacterial/physiology , DNA, Bacterial/veterinary , DNA, Ribosomal/classification , DNA, Ribosomal/genetics , DNA, Ribosomal/isolation & purification , DNA, Ribosomal/microbiology , DNA, Ribosomal/physiology , DNA, Ribosomal/veterinary , Fish Diseases/classification , Fish Diseases/genetics , Fish Diseases/isolation & purification , Fish Diseases/microbiology , Fish Diseases/physiology , Fish Diseases/veterinary , Fishes/classification , Fishes/genetics , Fishes/isolation & purification , Fishes/microbiology , Fishes/physiology , Fishes/veterinary , Flavobacteriaceae Infections/classification , Flavobacteriaceae Infections/genetics , Flavobacteriaceae Infections/isolation & purification , Flavobacteriaceae Infections/microbiology , Flavobacteriaceae Infections/physiology , Flavobacteriaceae Infections/veterinary , Flavobacterium/classification , Flavobacterium/genetics , Flavobacterium/isolation & purification , Flavobacterium/microbiology , Flavobacterium/physiology , Flavobacterium/veterinary , Fresh Water/classification , Fresh Water/genetics , Fresh Water/isolation & purification , Fresh Water/microbiology , Fresh Water/physiology , Fresh Water/veterinary , India/classification , India/genetics , India/isolation & purification , India/microbiology , India/physiology , India/veterinary , Molecular Sequence Data/classification , Molecular Sequence Data/genetics , Molecular Sequence Data/isolation & purification , Molecular Sequence Data/microbiology , Molecular Sequence Data/physiology , Molecular Sequence Data/veterinary , Phylogeny/classification , Phylogeny/genetics , Phylogeny/isolation & purification , Phylogeny/microbiology , Phylogeny/physiology , Phylogeny/veterinary , /classification , /genetics , /isolation & purification , /microbiology , /physiology , /veterinary
3.
Braz. j. biol ; 68(2): 409-414, May 2008. ilus, tab
Article in English | LILACS | ID: lil-486769

ABSTRACT

Flavobacterium columnare is the causative agent of columnaris disease in freshwater fish, implicated in skin and gill disease, often causing high mortality. The aim of this study was the isolation and characterization of Flavobacterium columnare in tropical fish in Brazil. Piracanjuba (Brycon orbignyanus), pacu (Piaractus mesopotamicus), tambaqui (Colossoma macropomum) and cascudo (Hypostomus plecostomus) were examined for external lesions showing signs of colunmaris disease such as greyish white spots, especially on the head, dorsal part and caudal fin of the fish. The sampling comprised 50 samples representing four different fish species selected for study. Samples for culture were obtained by skin and kidney scrapes with a sterile cotton swabs of columnaris disease fish and streaked onto Carlson and Pacha (1968) artificial culture medium (broth and solid) which were used for isolation. The strains in the liquid medium were Gram negative, long, filamentous, exhibited flexing movements (gliding motility), contained a large number of long slender bacteria and gathered into ‘columns'. Strains on the agar produced yellow-pale colonies, rather small, flat that had rhizoid edges. A total of four Flavobacterium columnare were isolated: 01 Brycon orbignyanus strain, 01 Piaractus mesopotamicus strain, 01 Colossoma macropomum strain, and 01 Hypostomus plecostomus strain. Biochemical characterization, with its absorption of Congo red dye, production of flexirubin-type pigments, H2S production and reduction of nitrates proved that the isolate could be classified as Flavobacterium columnare.


Flavobacterium columnare é o agente etiológico da columnariose em peixes de água doce, ocasionando enfermidade na pele e nas brânquias, provocando freqüentemente um grande número de mortalidade. O objetivo deste estudo foi o isolamento e a caracterização de Flavobacterium columnare em peixes tropicais no Brasil. Piracanjuba (Brycon orbignyanus), pacu (Piaractus mesopotamicus), tambaqui (Colossoma macropomum) e cascudo (Hypostomus plecostomus) foram examinados externamente com relação a sinais característicos de columnariose, como manchas acinzentadas na cabeça, região dorsal e pedúnculo caudal dos peixes. A amostragem compreendeu a coleta de 50 exemplares de peixes, representando as quatro diferentes espécies escolhidas para este estudo. Amostras para o isolamento foram obtidas através de raspado com swab estéril das lesões e do rim dos peixes clinicamente diagnosticados como acometidos por columnarios e imediatamente semeados em meios de culturas artificiais (líquido e sólido) próprios para o estudo de Flavobacterium segundo Carlson e Pacha (1968). No meio líquido, houve o desenvolvimento de microrganismos que observados em gota pendente apresentaram a forma de bacilos finos, longos, móveis por deslizamento. Através da coloração de Gram, apresentaram morfologia de bacilos finos, Gram negativos, agrupados em colunas. Em meio sólido, as colônias eram pequenas, cinza-amareladas, com borda em forma de raiz. No total, foram obtidos quatro isolamentos: 01 cepa de Brycon orbignyanus; 01 cepa de Piaractus mesopotamicus; 01 cepa de Colossoma macropomum; e 01 cepa de Hypostomus plecostomus. A caracterização bioquímica das amostras, como absorção do vermelho Congo, produção de flexirrubina, produção de H2S e redução do nitrato, sugere que os isolamentos poderiam ser classificados como Flavobacterium columnare.


Subject(s)
Animals , Fish Diseases/microbiology , Flavobacteriaceae Infections/veterinary , Flavobacterium/isolation & purification , Brazil , Fish Diseases/diagnosis , Flavobacteriaceae Infections/diagnosis , Flavobacteriaceae Infections/microbiology , Flavobacterium/classification
4.
Southeast Asian J Trop Med Public Health ; 1998 Dec; 29(4): 872-7
Article in English | IMSEAR | ID: sea-31149

ABSTRACT

The purpose of this investigation was to evaluate the usefulness of a co-agglutination procedure for the typing of Flavobacterium meningosepticum. The sensitivity and specificity of the co-agglutination test was compared to the slide agglutination test using reference strains of the bacterial species. Antisera were characterized by both technics to determine their titer and working dilution. The specificity of the sera was assessed by performing tests which include strains of other species and serotypes. A collection of 47 strains of F. meningosepticum isolated from clinical specimens were typed by both co-agglutination and slide agglutination methods. Co-agglutination proved to be markedly more specific than the slide procedure although both methods were similar in sensitivity. It was concluded that co-agglutination proved to be an excellent method for the serotyping of F. meningosepticum.


Subject(s)
Agglutination Tests/methods , Flavobacterium/classification , Gram-Negative Bacterial Infections/diagnosis , Humans , Meningitis/microbiology , Sensitivity and Specificity , Serotyping/methods
5.
Bol. micol ; 8(1/2): 47-54, jul.-dic. 1993. tab, mapas
Article in Spanish | LILACS | ID: lil-140497

ABSTRACT

Se realizó un estudio taxonómico de 109 cepas de bacterias heterótrofas aisladas de las aguas del Lago Peñuelas, localizado en la V Región, Valparaíso, Chile, junto a 8 cepas de referencia. Se efectuaron 107 pruebas fenotípicas que fueron analizadas por taxonomía numérica. Se encontraron 7 fenones utilizando el coeficiente de apareamiento simple de Sokal y Michener (Ssm) y la técnica de agrupamiento UPGMA, a un nivel de semejanza del 70 porciento. Los fenones A (9 cepas) y F(3), fueron asignados al género Bacillus, 41 cepas fueron incluidas en el género Flavobacterium (fenones C y E), el fenón B (11), fue asignado al género Aeromonas y los fenónes D(37) y G(6) fueron incluídos en el género Acinetobacter


Subject(s)
Acinetobacter/classification , Aeromonas/classification , Bacillus/classification , Flavobacterium/classification , Water Microbiology , Chile , Environmental Health , Lakes
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